Table 1 Genotypes and antibiotic susceptibility patterns of CA- & HA-MRSA from children ≤5 years in eastern Uganda
From: CA-MRSA and HA-MRSA coexist in community and hospital settings in Uganda
Isolate # | PVL | mecA | SCCmec | FOX | PEN | TET | ERY | SXT | CHL | GEN | CIP | CLI | RIF | VAN | LZD | MDR phenotype | Spa type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
HA-MRSA (n = 21) | |||||||||||||||||
52–1 | + | + | I | R | R | R | R | R | R | R | S | S | S | S | S | Yes | |
1320–1 | – | + | I | R | R | R | R | R | R | R | R | S | S | S | S | Yes | |
244C-1 | – | + | I | R | R | R | R | R | R | R | S | S | S | S | S | Yes | |
K1057–1 | – | + | I | R | R | R | S | S | R | R | S | S | S | S | S | Yes | t037 |
K264–1 | + | + | I | R | R | R | S | S | R | R | S | S | S | S | S | Yes | |
K284–1 | – | + | I | R | R | R | R | R | R | R | S | S | S | S | S | Yes | |
K36–1 | – | + | I | R | R | R | R | R | R | S | S | S | S | S | S | Yes | t037 |
K370–1 | – | + | I | R | R | R | R | R | R | R | S | S | S | S | S | Yes | |
K39–1 | – | + | I | R | R | R | R | R | R | R | R | S | S | S | S | Yes | |
K4834–1 | – | + | I | R | R | R | S | S | R | R | S | S | S | S | S | Yes | t037 |
K970–1 | – | + | I | R | R | R | S | I | S | S | I | S | S | S | S | No | t037 |
R030–1 | – | + | I | R | R | R | R | R | R | R | R | S | S | S | S | Yes | |
R10–1 | – | + | I | R | R | R | R | R | R | S | R | S | S | S | S | Yes | t12939 |
R110–1 | + | + | I | R | R | R | R | R | S | S | S | S | S | S | S | Yes | Unknown |
R19–1 | – | + | I | R | R | R | R | R | R | R | S | S | S | S | S | Yes | |
R220–1 | – | + | I | R | R | R | R | R | S | R | S | S | S | S | S | Yes | Unknown |
1322–1 | + | + | II | R | R | R | R | R | R | R | I | I | S | S | S | Yes | |
306C-1 | – | + | II | R | R | R | R | R | I | R | S | S | S | S | S | Yes | |
K911–1 | – | + | II | R | R | R | R | S | R | R | R | S | S | S | S | Yes | |
R160–1 | – | + | II | R | R | R | R | R | S | S | S | S | S | S | S | Yes | t002 |
R17–1 | – | + | III | R | R | R | S | R | S | I | S | S | S | S | S | Yes | t037 |
Total +/R HA-MRSA (%) | 4 (19) | 21 (100) | 21 (100) | 21 (100) | 21 (100) | 21 (100) | 16 (76.2) | 16 (76.2) | 15 (71.4) | 15 (71.4) | 5 (23.8) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 20 (95.2) | |
CA-MRSA (n = 21) | |||||||||||||||||
1325–1 | – | + | IV | R | R | R | R | R | R | I | S | S | S | S | S | Yes | Unknown |
1326–1 | + | + | IV | R | R | R | R | S | S | S | R | S | S | S | S | Yes | |
K2240–1 | – | + | IV | R | R | S | S | S | S | S | R | I | S | S | S | No | t4353 |
K2810–1 | – | + | IV | R | R | R | R | R | S | S | R | S | S | S | S | Yes | |
R31B-1 | – | + | IV | R | R | R | R | R | S | R | R | S | S | S | S | Yes | t064 |
R310–1 | – | + | IV | R | R | R | R | R | R | R | S | S | S | S | S | Yes | t064 |
R33–1 | + | + | IV | R | R | R | R | R | R | R | S | S | S | S | S | Yes | t064 |
K3700–1 | – | + | IV | R | R | R | S | S | R | R | S | S | S | S | S | Yes | |
R0100–1 | – | + | IV | R | R | R | R | R | S | S | S | S | S | S | S | Yes | t064 |
R02–1 | – | + | IV | R | R | R | R | R | R | S | R | S | S | S | S | Yes | Unknown |
R020–1 | – | + | IV | R | R | S | S | R | R | R | S | S | S | S | S | Yes | |
R0300–1 | – | + | IV | R | R | R | R | R | R | S | S | S | S | S | S | Yes | |
R06–1 | – | + | IV | R | R | R | R | R | S | R | S | S | S | S | S | Yes | t064 |
R08–1 | + | + | IV | R | R | R | R | R | R | R | S | S | S | S | S | Yes | t064 |
R18–1 | – | + | IV | R | R | R | R | S | R | S | R | S | S | S | S | Yes | |
R20–1 | – | + | IV | R | R | I | R | R | R | R | S | S | S | S | S | Yes | t064 |
R26A-1 | – | + | IV | R | R | R | R | R | S | S | R | S | S | S | S | Yes | t064 |
R040–1 | – | + | V | R | R | R | R | R | R | R | R | S | S | S | S | Yes | |
K60–1 | + | + | V | R | R | R | R | R | S | S | R | S | S | S | S | Yes | |
K38–1 | – | + | V | R | R | R | R | R | R | R | I | S | S | S | S | Yes | |
K350C-1 | + | + | V | R | R | R | S | S | S | S | R | S | S | S | S | Yes | Unknown |
Total +/R CA-MRSA (%) | 5 (24) | 21 (100) | 21 (100) | 21 (100) | 21 (100) | 18 (85.7) | 17 (81) | 16 (76.2) | 12 (57.1) | 10 (47.6) | 10 (47.6) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 20 (95.2) | |
Grand Total +/R (%) | 9 (21.4) | 42 (100) | 42 (100) | 42 (100) | 42 (100) | 39 (92.9) | 33 (78.6) | 32 (76.2) | 27 (64.3) | 25 (59.5) | 15 (35.7) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 40/42 (95.2) | |