Table 5 Genotyping pattern of H. pylori strains isolated from different types of raw milk samples
Type of raw milk samples (N of H. pylori strains) | Genotyping pattern (%) | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
s1am1a | s1am1b | s1Â am2 | s1bm1a | s1bm1b | s1bm2 | s1cm1a | s1cm1b | s1Â cm2 | s2m1a | s2m1b | s2Â m2 | CagA+ | CagA- | IceA1/IceA2 | OipA+ | OipA- | BabA2+ | BabA2- | |
Bovine (9) | 5 (55.55) | 2 (22.22) | 4 (44.44) | 2 (22.22) | 1 (11.11) | 2 (22.22) | 1 (11.11) | – | 1 (11.11) | 4 (44.44) | 2 (22.22) | 3 (33.33) | 6 (66.66) | 3 (33.33) | 1 (11.11) | 3 (33.33) | 6 (66.66) | 4 (44.44) | 5 (55.55) |
Ovine (19) | 13 (68.42) | 4 (21.05) | 11 (57.89) | 4 (21.05) | 2 (10.52) | 3 (15.78) | 1 (5.26) | 1 (5.26) | 1 (5.26) | 15 (78.94) | 5 (26.31) | 12 (63.15) | 16 (84.21) | 3 (15.78) | 3 (15.78) | 9 (47.36) | 10 (52.63) | 10 (52.63) | 9 (47.36) |
Caprine (18) | 11 (61.11) | 3 (16.66) | 10 (55.55) | 2 (11.11) | 1 (5.55) | 2 (11.11) | 1 (5.55) | – | 1 (5.55) | 10 (55.55) | 3 (16.66) | 8 (44.44) | 13 (72.22) | 5 (27.77) | 2 (11.11) | 7 (38.88) | 11 (61.11) | 8 (44.44) | 10 (55.55) |
Buffalo (14) | 7 (50) | 1 (7.14) | 3 (21.42) | 2 (14.28) | 1 (7.14) | 1 (7.14) | 1 (7.14) | – | – | 7 (50) | 1 (7.14) | 5 (35.71) | 11 (78.57) | 3 (21.42) | 1 (7.14) | 5 (35.71) | 9 (64.28) | 6 (42.85) | 8 (57.14) |
Camel (7) | 2 (28.57) | – | 1 (14.28) | 1 (14.28) | – | – | 1 (14.28) | – | – | 2 (28.57) | – | 1 (14.28) | 3 (42.85) | 4 (57.14) | – | 1 (14.28) | 6 (85.71) | 2 (28.57) | 5 (71.42) |
Total (67) | 38 (56.71) | 10 (14.92) | 29 (43.28) | 11 (16.41) | 5 (7.46) | 8 (11.94) | 5 (7.46) | 1 (1.49) | 3 (4.47) | 38 (56.71) | 11 (16.41) | 29 (43.28) | 49 (73.13) | 18 (26.86) | 7 (10.44) | 25 (37.31) | 42 (62.68) | 30 (44.77) | 37 (55.22) |