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Table 5 Genotyping pattern of H. pylori strains isolated from different types of raw milk samples

From: Phenotypic analysis of antibiotic resistance and genotypic study of the vacA, cagA, iceA, oipA and babA genotypes of the Helicobacter pylori strains isolated from raw milk

Type of raw milk samples (N of H. pylori strains) Genotyping pattern (%)
s1am1a s1am1b s1 am2 s1bm1a s1bm1b s1bm2 s1cm1a s1cm1b s1 cm2 s2m1a s2m1b s2 m2 CagA+ CagA- IceA1/IceA2 OipA+ OipA- BabA2+ BabA2-
Bovine (9) 5 (55.55) 2 (22.22) 4 (44.44) 2 (22.22) 1 (11.11) 2 (22.22) 1 (11.11) 1 (11.11) 4 (44.44) 2 (22.22) 3 (33.33) 6 (66.66) 3 (33.33) 1 (11.11) 3 (33.33) 6 (66.66) 4 (44.44) 5 (55.55)
Ovine (19) 13 (68.42) 4 (21.05) 11 (57.89) 4 (21.05) 2 (10.52) 3 (15.78) 1 (5.26) 1 (5.26) 1 (5.26) 15 (78.94) 5 (26.31) 12 (63.15) 16 (84.21) 3 (15.78) 3 (15.78) 9 (47.36) 10 (52.63) 10 (52.63) 9 (47.36)
Caprine (18) 11 (61.11) 3 (16.66) 10 (55.55) 2 (11.11) 1 (5.55) 2 (11.11) 1 (5.55) 1 (5.55) 10 (55.55) 3 (16.66) 8 (44.44) 13 (72.22) 5 (27.77) 2 (11.11) 7 (38.88) 11 (61.11) 8 (44.44) 10 (55.55)
Buffalo (14) 7 (50) 1 (7.14) 3 (21.42) 2 (14.28) 1 (7.14) 1 (7.14) 1 (7.14) 7 (50) 1 (7.14) 5 (35.71) 11 (78.57) 3 (21.42) 1 (7.14) 5 (35.71) 9 (64.28) 6 (42.85) 8 (57.14)
Camel (7) 2 (28.57) 1 (14.28) 1 (14.28) 1 (14.28) 2 (28.57) 1 (14.28) 3 (42.85) 4 (57.14) 1 (14.28) 6 (85.71) 2 (28.57) 5 (71.42)
Total (67) 38 (56.71) 10 (14.92) 29 (43.28) 11 (16.41) 5 (7.46) 8 (11.94) 5 (7.46) 1 (1.49) 3 (4.47) 38 (56.71) 11 (16.41) 29 (43.28) 49 (73.13) 18 (26.86) 7 (10.44) 25 (37.31) 42 (62.68) 30 (44.77) 37 (55.22)
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