Target | Primer sequence (5′ to 3′) | Amplicon size (bp) | Reference |
---|---|---|---|
β-lactamase | |||
bla CTX-M-1 | F: GGTTAAAAAATCACTGCGTC | 873 | Cui et al., 2015 [16] |
R: TTACAAACCGTCGGTGACGA | |||
bla CTX-M-2 | F: CGACGCTACCCCTGCTATT | 552 | Zong et al., 2008 [17] |
R: CCAGCGTCAGATTTTTCAGG | |||
bla CTX-M-8 | F: TCGCGTTAAGCGGATGATGC | 689 | Zong et al., 2008 [17] |
R: AACCCACGATGTGGGTAGC | |||
bla CTX-M-9 | F: AGAGTGCAACGGATGATG | 868 | Cui et al., 2015 [16] |
R: CCAGTTACAGCCCTTCGG | |||
bla CTX-M-25 | F: TTGTTGAGTCAGCGGGTTGA | 497 | Liu et al., 2015 [18] |
R: GCGCGACCTTCCGGCCAAAT | |||
bla SHV | F: CGCCGGGTTATTCTTATTTGTCGC | 1015 | Zong et al., 2008 [17] |
R: TCTTTCCGATGCCGCCGCCAGTCA | |||
bla TEM | F: ATGAGTATTCAACTTTCCG | 876 | This study |
R: CCAATGCTTAATCAGTGAG | |||
bla OXA | F: ATTAAGCCCTTTACCAAACCA | 890 | Cui et al., 2015 [16] |
R: AAGGGTTGGGCGATTTTGCCA | |||
bla MOX | F: GCTGCTCAAGGAGCACAGGAT | 520 | Cui et al., 2015 [16] |
R: CACATTGACATAGGTGTGGTGC | |||
bla FOX | F: AACATGGGGTATCAGGGAGATG | 190 | Cui et al., 2015 [16] |
R: CAAAGCGCGTAACCGGATTGG | |||
bla DHA | F: AACTTTCACAGGTGTGCTGGGT | 405 | Cui et al., 2015 [16] |
R: CCGTACGCATACTGGCTTTGC | |||
bla CIT | F: TGGCCAGAACTGACAGGCAAA | 462 | Cui et al., 2015 [16] |
R: TTTCTCCTGAACGTGGCTGGC | |||
bla ACC | F: AACAGCCTCAGCAGCCGGTTA | 346 | Cui et al., 2015 [16] |
R: TTCGCCGCAATCATCCCTAGC | |||
bla MIR | F: TCGGTAAAGCCGATGTTGCGG | 302 | Cui et al., 2015 [16] |
R: CTTCCACTGCGGCTGCCAGTT | |||
PMQRs | |||
qnrA | F: ATTTCTCACGCCAGGATTTG | 516 | Colobatiu et al.,2015 [19] |
R: GATCGGCAAAGGTTAGGTCA | |||
qnrB | F: GATCGTGAAAGCCAGAAAGG | 476 | Colobatiu et al.,2015 [19] |
R: ACGATGCCTGGTAGTTGTCC | |||
qnrD | F: CGAGATCAATTTACGGGGAATA | 656 | Cui et al.,2015 [13] |
R: AACAAGCTGAAGCGCCTG | |||
qnrS | F: ACGACATTCGTCAACTGCAA | 417 | Colobatiu et al.,2015 [19] |
R: TAAATTGGCACCCTGTAGGC | |||
aac(6′)-Ib-cr | F: CCCGCTTTCTCGTAGCA | 544 | Colobatiu et al.,2015 [19] |
R: TTAGGCATCACTGCGTCTTC | |||
qepA | F: CGTGTTGCTGGAGTTCTTC | 403 | Colobatiu et al.,2015 [19] |
R: CTGCAGGTACTGCGTCATG | |||
QRDR | |||
gyrA | F: TACACCGGTCAACATTGAGG | 648 | Hu et al.,2007 [20] |
R: TTAATGATTGCCGCCGTCGG | |||
gyrB | F: TGAAATGACCCGCCGTAAAGG | 309 | Hu et al.,2007 [20] |
R: GCTGTGATAACGCAGTTTGTCCGGG | |||
parC | F: GTACGTGATCATGGACCGTG | 531 | Hu et al.,2007 [20] |
R: TTCGGCTGGTCGATTAATGC | |||
parE | F: ATGCGTGCGGCTAAAAAAGTG | 290 | Hu et al.,2007 [20] |
R: TCGTCGCTGTCAGGATCGATAC |